Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D1781_12025 | Not Available | Negative | 2423648 - 2424787 | 40635.4 |
| 30s ribosomal protein s20 | D1781_12030 | Not Available | Positive | 2424939 - 2425199 | 9101.18 |
| duf853 family protein | D1781_12035 | Not Available | Negative | 2425261 - 2427099 | 63683.7 |
| dna polymerase iii subunit delta | D1781_12040 | Not Available | Negative | 2427148 - 2428167 | 35398.2 |
| comec/rec2 family competence protein | D1781_12045 | Not Available | Negative | 2428178 - 2430490 | 76890.7 |
| comea family dna-binding protein | D1781_12050 | Not Available | Negative | 2430487 - 2431065 | 18761.7 |
| leucine--trna ligase | D1781_12055 | Not Available | Negative | 2431179 - 2433719 | 93948.2 |
| deda family protein | D1781_12060 | Not Available | Positive | 2433880 - 2434485 | 22080.5 |
| abc transporter substrate-binding protein | D1781_12065 | Not Available | Negative | 2434551 - 2435507 | 32257.0 |
| abc transporter permease | D1781_12070 | Not Available | Negative | 2435512 - 2436249 | 25603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
