Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4870 domain-containing protein | D1781_11975 | Not Available | Positive | 2414597 - 2414977 | 13666.2 |
| duf4870 domain-containing protein | D1781_11980 | Not Available | Positive | 2414993 - 2415364 | 13310.6 |
| duf4870 domain-containing protein | D1781_11985 | Not Available | Positive | 2415504 - 2415821 | 11231.4 |
| coproporphyrinogen iii oxidase | D1781_11990 | Not Available | Negative | 2415823 - 2417055 | 43483.1 |
| had family hydrolase | D1781_11995 | Not Available | Positive | 2417036 - 2417788 | 26312.9 |
| duf1990 domain-containing protein | D1781_12000 | Not Available | Negative | 2417800 - 2418519 | 25620.9 |
| duf1990 family protein | D1781_12005 | Not Available | Negative | 2418336 - 2418971 | 22505.8 |
| elongation factor 4 | D1781_12010 | Not Available | Negative | 2418968 - 2420812 | 67186.2 |
| nudix domain-containing protein | D1781_12015 | Not Available | Positive | 2420858 - 2421361 | 18620.8 |
| atp-dependent dna helicase recq | D1781_12020 | Not Available | Positive | 2421458 - 2423593 | 76130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
