Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | D1781_11925 | Not Available | Negative | 2405362 - 2406663 | 46889.6 |
| rrna maturation rnase ybey | D1781_11930 | Not Available | Negative | 2406660 - 2407130 | 17052.2 |
| phoh family protein | D1781_11935 | Not Available | Negative | 2407127 - 2408200 | 39532.5 |
| hit domain-containing protein | D1781_11940 | Not Available | Negative | 2408290 - 2408682 | 13609.3 |
| flavodoxin family protein | D1781_11945 | Not Available | Negative | 2408827 - 2409477 | 23148.3 |
| transcriptional regulator | D1781_11950 | Not Available | Positive | 2409449 - 2409910 | 16060.2 |
| argininosuccinate synthase | D1781_11955 | Not Available | Positive | 2409945 - 2411360 | 51366.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D1781_11960 | Not Available | Negative | 2411495 - 2412217 | 25118.1 |
| molecular chaperone dnaj | D1781_11965 | Not Available | Negative | 2412217 - 2413302 | 38668.1 |
| heat-inducible transcriptional repressor hrca | D1781_11970 | Not Available | Negative | 2413369 - 2414409 | 37760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
