Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_11725 | Not Available | Negative | 2363082 - 2364197 | 37984.9 |
| rna polymerase sigma factor | D1781_11730 | Not Available | Negative | 2364197 - 2364856 | 24536.1 |
| flotillin family protein | D1781_11735 | Not Available | Positive | 2364883 - 2366277 | 48979.4 |
| abc transporter permease | D1781_11740 | Not Available | Positive | 2366353 - 2369511 | 105837.0 |
| hypothetical protein | D1781_11745 | Not Available | Positive | 2369508 - 2372165 | 89354.4 |
| abc transporter atp-binding protein | D1781_11750 | Not Available | Positive | 2372162 - 2373061 | 32552.6 |
| abc transporter atp-binding protein | D1781_11755 | Not Available | Positive | 2373058 - 2373735 | 23930.9 |
| sdr family oxidoreductase | D1781_11760 | Not Available | Negative | 2373766 - 2374653 | 31339.7 |
| hypothetical protein | D1781_11765 | Not Available | Positive | 2374874 - 2375311 | 15914.5 |
| hypothetical protein | D1781_11770 | Not Available | Negative | 2375343 - 2376419 | 37368.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
