Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp s-malonyltransferase | D1781_11525 | Not Available | Positive | 2324553 - 2325458 | 30230.3 |
| ketoacyl-acp synthase iii | D1781_11530 | Not Available | Positive | 2325455 - 2326459 | 34731.1 |
| acyl carrier protein | D1781_11535 | Not Available | Positive | 2326545 - 2326793 | 8856.34 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | D1781_11540 | Not Available | Positive | 2326823 - 2328064 | 42930.8 |
| nad(+) synthase | D1781_11545 | Not Available | Positive | 2328093 - 2330141 | 74665.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | D1781_11550 | Not Available | Negative | 2330152 - 2331312 | 42299.3 |
| ribonuclease activity regulator rraa | D1781_11555 | Not Available | Negative | 2331309 - 2332151 | 29821.2 |
| duf3145 domain-containing protein | D1781_11560 | Not Available | Negative | 2332520 - 2333026 | 18453.6 |
| nadp-dependent oxidoreductase | D1781_11565 | Not Available | Negative | 2333228 - 2334178 | 32510.9 |
| bifunctional 3'-5' exonuclease/dna polymerase | D1781_11570 | Not Available | Negative | 2334226 - 2335836 | 57380.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
