Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formylglycine-generating enzyme family protein | D1781_11470 | Not Available | Positive | 2312687 - 2313361 | 24335.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D1781_11475 | Not Available | Positive | 2313397 - 2314209 | 28549.0 |
| hypothetical protein | D1781_11480 | Not Available | Negative | 2314277 - 2314489 | 7851.85 |
| rok family protein | D1781_11485 | Not Available | Positive | 2314524 - 2315339 | 28763.0 |
| duf1345 domain-containing protein | D1781_11495 | Not Available | Negative | 2315953 - 2316591 | 22376.5 |
| hypothetical protein | D1781_11500 | Not Available | Negative | 2316602 - 2317345 | 26832.7 |
| hypothetical protein | D1781_11505 | Not Available | Negative | 2317342 - 2320080 | 90141.9 |
| Trna-val | Not Available | Not Available | Positive | 2320243 - 2320318 | Not Available |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D1781_11515 | Not Available | Positive | 2320440 - 2323166 | 100577.0 |
| pucr family transcriptional regulator | D1781_11520 | Not Available | Positive | 2323180 - 2324454 | 45631.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
