Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | D1781_11370 | Not Available | Negative | 2284414 - 2285526 | 38522.8 |
| dna topoisomerase iv subunit a | D1781_11375 | Not Available | Positive | 2285635 - 2288061 | 86021.5 |
| serine protease | D1781_11380 | Not Available | Positive | 2288161 - 2290173 | 69138.2 |
| type iia dna topoisomerase subunit b | D1781_11385 | Not Available | Negative | 2290264 - 2292348 | 75850.5 |
| hypothetical protein | D1781_11390 | Not Available | Positive | 2292523 - 2292756 | 8571.9 |
| glutamine amidotransferase | D1781_11395 | Not Available | Negative | 2292827 - 2293552 | 24218.0 |
| duf1727 domain-containing protein | D1781_11400 | Not Available | Negative | 2293549 - 2294763 | 42449.3 |
| rna polymerase sigma factor | D1781_11405 | Not Available | Negative | 2294787 - 2296109 | 48675.4 |
| mfs transporter | D1781_11410 | Not Available | Negative | 2296261 - 2297604 | 45860.9 |
| pac2 family protein | D1781_11415 | Not Available | Negative | 2297601 - 2298518 | 33689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
