Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | D1781_11320 | Not Available | Positive | 2271810 - 2273972 | 76432.2 |
| hypothetical protein | D1781_11325 | Not Available | Negative | 2274037 - 2275005 | 35467.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | D1781_11330 | Not Available | Negative | 2275191 - 2277113 | 68939.3 |
| aconitate hydratase | D1781_11335 | Not Available | Negative | 2277223 - 2280075 | 102129.0 |
| duf3159 domain-containing protein | D1781_11340 | Not Available | Negative | 2280161 - 2280862 | 24599.8 |
| duf3710 domain-containing protein | D1781_11345 | Not Available | Negative | 2280859 - 2281488 | 22363.8 |
| dutp diphosphatase | D1781_11350 | Not Available | Negative | 2281485 - 2281934 | 15132.2 |
| duf3093 domain-containing protein | D1781_11355 | Not Available | Positive | 2281992 - 2282444 | 16063.9 |
| duf4193 domain-containing protein | D1781_11360 | Not Available | Negative | 2282530 - 2282823 | 10609.2 |
| duf3071 domain-containing protein | D1781_11365 | Not Available | Positive | 2282895 - 2284379 | 53712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
