Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit domain-containing protein | D1781_11220 | Not Available | Negative | 2253424 - 2253900 | 17261.3 |
| threonine--trna ligase | D1781_11225 | Not Available | Negative | 2253975 - 2255987 | 74344.6 |
| hnh endonuclease | D1781_11230 | Not Available | Negative | 2256244 - 2257713 | 52881.8 |
| hypothetical protein | D1781_11235 | Not Available | Negative | 2257866 - 2258513 | 24138.7 |
| gtp-binding protein | D1781_11240 | Not Available | Negative | 2258533 - 2259792 | 45430.0 |
| sulfate adenylyltransferase subunit cysd | D1781_11245 | Not Available | Negative | 2259792 - 2260700 | 33468.5 |
| adenylyl-sulfate kinase | D1781_11250 | Not Available | Negative | 2260697 - 2261212 | 17532.9 |
| Trna-val | Not Available | Not Available | Positive | 2262074 - 2262148 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 2262167 - 2262240 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2262288 - 2262359 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
