Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | D1781_11165 | Not Available | Negative | 2245437 - 2245856 | 14789.6 |
| holliday junction branch migration dna helicase ruvb | D1781_11170 | Not Available | Negative | 2245972 - 2246997 | 36570.1 |
| holliday junction branch migration protein ruva | D1781_11175 | Not Available | Negative | 2246994 - 2247590 | 20492.0 |
| hypothetical protein | D1781_11180 | Not Available | Negative | 2247675 - 2247974 | 10328.5 |
| hypothetical protein | D1781_11190 | Not Available | Negative | 2249195 - 2249662 | 15752.7 |
| crossover junction endodeoxyribonuclease ruvc | D1781_11195 | Not Available | Negative | 2249722 - 2250288 | 19822.1 |
| yebc/pmpr family dna-binding transcriptional regulator | D1781_11200 | Not Available | Negative | 2250285 - 2251049 | 27154.6 |
| hypothetical protein | D1781_11205 | Not Available | Negative | 2251095 - 2251703 | 21031.6 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | D1781_11210 | Not Available | Negative | 2251804 - 2252385 | 20668.9 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | D1781_11215 | Not Available | Negative | 2252379 - 2253314 | 32261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
