Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | D1781_11115 | Not Available | Negative | 2231752 - 2232252 | 17466.0 |
| alanine--trna ligase | D1781_11120 | Not Available | Negative | 2232249 - 2234906 | 95123.6 |
| 30s ribosomal protein s4 | D1781_11125 | Not Available | Negative | 2235195 - 2235824 | 23561.8 |
| replication-associated recombination protein a | D1781_11130 | Not Available | Negative | 2236029 - 2237387 | 48446.9 |
| peptidylprolyl isomerase | D1781_11135 | Not Available | Positive | 2237386 - 2238297 | 30937.4 |
| duf349 domain-containing protein | D1781_11140 | Not Available | Positive | 2238452 - 2239630 | 43497.5 |
| hypothetical protein | D1781_11145 | Not Available | Positive | 2239711 - 2240250 | 18748.6 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | D1781_11150 | Not Available | Negative | 2240279 - 2242498 | 82639.9 |
| protein translocase subunit secf | D1781_11155 | Not Available | Negative | 2242596 - 2243630 | 36372.4 |
| protein translocase subunit secd | D1781_11160 | Not Available | Negative | 2243630 - 2245336 | 59841.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
