Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | D1781_11015 | Not Available | Negative | 2213284 - 2214666 | 48561.6 |
| nudix domain-containing protein | D1781_11020 | Not Available | Positive | 2214791 - 2215690 | 32504.0 |
| ethd family reductase | D1781_11025 | Not Available | Positive | 2215768 - 2216073 | 10822.6 |
| phosphonatase-like hydrolase | D1781_11030 | Not Available | Negative | 2216151 - 2216828 | 23569.9 |
| tigr03364 family fad-dependent oxidoreductase | D1781_11035 | Not Available | Positive | 2216995 - 2218131 | 40091.5 |
| abc transporter substrate-binding protein | D1781_11040 | Not Available | Positive | 2218197 - 2219369 | 39988.9 |
| abc transporter permease subunit | D1781_11045 | Not Available | Positive | 2219374 - 2220315 | 32489.8 |
| abc transporter permease subunit | D1781_11050 | Not Available | Positive | 2220312 - 2221199 | 31292.2 |
| abc transporter atp-binding protein | D1781_11055 | Not Available | Positive | 2221196 - 2222269 | 38021.8 |
| glycerophosphodiester phosphodiesterase | D1781_11060 | Not Available | Positive | 2222479 - 2223456 | 35819.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
