Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | D1781_10915 | Not Available | Negative | 2189503 - 2190153 | 22679.9 |
| hypothetical protein | D1781_10920 | Not Available | Negative | 2190195 - 2190680 | 16468.2 |
| alpha/beta fold hydrolase | D1781_10925 | Not Available | Negative | 2190799 - 2191740 | 34579.6 |
| 3'-kinase | D1781_10930 | Not Available | Positive | 2191839 - 2192597 | 27074.4 |
| aminotransferase | D1781_10935 | Not Available | Negative | 2192581 - 2195424 | 99086.0 |
| rrna small subunit methyltransferase b | D1781_10940 | Not Available | Negative | 2195481 - 2196872 | 48512.4 |
| methionyl-trna formyltransferase | D1781_10945 | Not Available | Negative | 2196869 - 2197783 | 31388.0 |
| primosomal protein n' | D1781_10950 | Not Available | Negative | 2197901 - 2199631 | 60815.8 |
| methionine adenosyltransferase | D1781_10955 | Not Available | Negative | 2199796 - 2200983 | 42239.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D1781_10960 | Not Available | Negative | 2201023 - 2202252 | 41338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
