Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | D1781_10865 | Not Available | Negative | 2180815 - 2182041 | 42941.8 |
| indole-3-glycerol phosphate synthase trpc | D1781_10870 | Not Available | Negative | 2182038 - 2182817 | 27332.7 |
| hypothetical protein | D1781_10875 | Not Available | Negative | 2182844 - 2183071 | 7374.13 |
| hypothetical protein | D1781_10880 | Not Available | Negative | 2183082 - 2183747 | 21883.6 |
| anthranilate synthase component i | D1781_10885 | Not Available | Negative | 2183663 - 2185213 | 55103.7 |
| phosphoribosyl-amp cyclohydrolase | D1781_10890 | Not Available | Negative | 2185219 - 2185605 | 13793.2 |
| imidazole glycerol phosphate synthase subunit hisf | D1781_10895 | Not Available | Negative | 2185602 - 2186378 | 26401.5 |
| atp phosphoribosyltransferase | D1781_10900 | Not Available | Negative | 2186378 - 2187217 | 29895.9 |
| phosphoribosyl-atp diphosphatase | D1781_10905 | Not Available | Negative | 2187258 - 2187521 | 9725.59 |
| hnh endonuclease | D1781_10910 | Not Available | Positive | 2188023 - 2189399 | 49588.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
