Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D1781_10765 | Not Available | Positive | 2156964 - 2158178 | 40614.6 |
| transcriptional regulator | D1781_10770 | Not Available | Positive | 2158273 - 2158629 | 12880.2 |
| m56 family peptidase | D1781_10775 | Not Available | Positive | 2158634 - 2159569 | 32365.1 |
| 30s ribosomal protein s1 | D1781_10780 | Not Available | Negative | 2159685 - 2161124 | 53165.6 |
| duf885 domain-containing protein | D1781_10785 | Not Available | Negative | 2161345 - 2163000 | 60436.9 |
| class ii glutamine amidotransferase | D1781_10790 | Not Available | Positive | 2163176 - 2163997 | 28817.2 |
| hpr family phosphocarrier protein | D1781_10795 | Not Available | Negative | 2164058 - 2164327 | 8843.47 |
| pts sugar transporter subunit iia | D1781_10800 | Not Available | Negative | 2164370 - 2164825 | 15712.4 |
| pts lactose transporter subunit iib | D1781_10805 | Not Available | Negative | 2164829 - 2165137 | 10560.0 |
| pts mannose transporter subunit iia | D1781_10810 | Not Available | Negative | 2165277 - 2166506 | 41599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
