Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | D1781_10715 | Not Available | Negative | 2142256 - 2142879 | 23037.0 |
| dna-binding protein whia | D1781_10720 | Not Available | Negative | 2143001 - 2143978 | 35427.4 |
| rnase adapter rapz | D1781_10725 | Not Available | Negative | 2144122 - 2145027 | 32247.3 |
| excinuclease abc subunit uvrc | D1781_10730 | Not Available | Negative | 2145072 - 2147066 | 73444.1 |
| excinuclease abc subunit uvra | D1781_10735 | Not Available | Negative | 2147083 - 2149968 | 105607.0 |
| glycosyl transferase | D1781_10740 | Not Available | Negative | 2150036 - 2151289 | 44476.2 |
| glycosyltransferase family 2 protein | D1781_10745 | Not Available | Positive | 2151347 - 2153188 | 65340.1 |
| excinuclease abc subunit uvrb | D1781_10750 | Not Available | Negative | 2153306 - 2155372 | 76967.0 |
| eama family transporter | D1781_10755 | Not Available | Positive | 2155461 - 2156303 | 27861.3 |
| dephospho-coa kinase | D1781_10760 | Not Available | Negative | 2156315 - 2156908 | 20856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
