Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | D1781_10665 | Not Available | Positive | 2131705 - 2133846 | 76747.1 |
| transaldolase | D1781_10670 | Not Available | Positive | 2133880 - 2135004 | 40147.2 |
| glucose-6-phosphate dehydrogenase | D1781_10675 | Not Available | Positive | 2135086 - 2136615 | 56344.1 |
| opca protein | D1781_10680 | Not Available | Positive | 2136612 - 2137583 | 33581.0 |
| 6-phosphogluconolactonase | D1781_10685 | Not Available | Positive | 2137580 - 2138359 | 28411.5 |
| rna polymerase-binding protein rbpa | D1781_10690 | Not Available | Negative | 2138421 - 2138789 | 13127.2 |
| preprotein translocase subunit secg | D1781_10695 | Not Available | Negative | 2138810 - 2139055 | 8389.79 |
| triose-phosphate isomerase | D1781_10700 | Not Available | Negative | 2139177 - 2139962 | 27149.3 |
| phosphoglycerate kinase | D1781_10705 | Not Available | Negative | 2139959 - 2141164 | 41745.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D1781_10710 | Not Available | Negative | 2141170 - 2142174 | 35638.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
