Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin transporter bioy | D1781_10615 | Not Available | Positive | 2122311 - 2122910 | 20224.3 |
| plp-dependent aminotransferase family protein | D1781_10620 | Not Available | Negative | 2122970 - 2124406 | 49678.0 |
| hypothetical protein | D1781_10625 | Not Available | Positive | 2124460 - 2125095 | 21514.4 |
| metal-sulfur cluster assembly factor | D1781_10630 | Not Available | Negative | 2125222 - 2125551 | 12194.4 |
| fe-s cluster assembly atpase sufc | D1781_10635 | Not Available | Negative | 2125551 - 2126318 | 27671.9 |
| non-heme iron oxygenase ferredoxin subunit | D1781_10640 | Not Available | Negative | 2126342 - 2126683 | 11820.9 |
| fe-s cluster assembly protein sufd | D1781_10645 | Not Available | Negative | 2126680 - 2127831 | 40375.0 |
| fe-s cluster assembly protein sufb | D1781_10650 | Not Available | Negative | 2127943 - 2129361 | 52573.4 |
| cytochrome oxidase assembly protein | D1781_10655 | Not Available | Negative | 2129555 - 2130490 | 31837.6 |
| protoheme ix farnesyltransferase | D1781_10660 | Not Available | Negative | 2130634 - 2131572 | 33727.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
