Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | D1781_10565 | Not Available | Negative | 2113786 - 2114034 | 9326.96 |
| abc transporter atp-binding protein | D1781_10570 | Not Available | Negative | 2114170 - 2114961 | 28362.9 |
| glycogen synthase | D1781_10575 | Not Available | Negative | 2115008 - 2116189 | 42246.4 |
| glucose-1-phosphate adenylyltransferase | D1781_10580 | Not Available | Positive | 2116298 - 2117539 | 45209.7 |
| phosphoserine phosphatase serb | D1781_10585 | Not Available | Positive | 2117559 - 2118179 | 21356.0 |
| sdr family oxidoreductase | D1781_10590 | Not Available | Negative | 2118282 - 2118989 | 24138.1 |
| duf3099 domain-containing protein | D1781_10595 | Not Available | Positive | 2119142 - 2119357 | 7694.68 |
| hypothetical protein | D1781_10600 | Not Available | Positive | 2119354 - 2119575 | 8527.38 |
| surf1 family protein | D1781_10605 | Not Available | Positive | 2119601 - 2120449 | 30435.8 |
| abc transporter atp-binding protein | D1781_10610 | Not Available | Negative | 2120564 - 2122162 | 57765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
