Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_01005 | Not Available | Negative | 198207 - 198806 | 20232.2 |
| Trna-ala | Not Available | Not Available | Positive | 199144 - 199219 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 199294 - 199370 | Not Available |
| duf3566 domain-containing protein | D1781_01020 | Not Available | Negative | 199432 - 199884 | 15788.5 |
| dna gyrase subunit a | D1781_01025 | Not Available | Negative | 199832 - 202336 | 92333.6 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D1781_01030 | Not Available | Negative | 202462 - 204477 | 73862.0 |
| duf721 domain-containing protein | D1781_01035 | Not Available | Negative | 204776 - 205264 | 17731.8 |
| dna replication/repair protein recf | D1781_01040 | Not Available | Negative | 205252 - 206415 | 41447.3 |
| decarboxylating 6-phosphogluconate dehydrogenase | D1781_01045 | Not Available | Negative | 206488 - 207408 | 33236.5 |
| dna polymerase iii subunit beta | D1781_01050 | Not Available | Negative | 207449 - 208588 | 40685.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
