Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase | D1781_10515 | Not Available | Positive | 2103730 - 2104578 | 29811.5 |
| hypothetical protein | D1781_10520 | Not Available | Positive | 2104776 - 2105672 | 30821.2 |
| gntr family transcriptional regulator | D1781_10525 | Not Available | Positive | 2105669 - 2106028 | 12749.1 |
| histidine phosphatase family protein | D1781_10530 | Not Available | Positive | 2106092 - 2106715 | 22415.4 |
| glycosyltransferase family 1 protein | D1781_10535 | Not Available | Negative | 2106702 - 2107799 | 39785.0 |
| alpha/beta hydrolase | D1781_10540 | Not Available | Negative | 2107796 - 2108692 | 31619.9 |
| maltose alpha-d-glucosyltransferase | D1781_10545 | Not Available | Positive | 2108828 - 2110597 | 67530.4 |
| 3'-5' exonuclease | D1781_10550 | Not Available | Positive | 2110972 - 2111658 | 24739.4 |
| n-acetyltransferase | D1781_10555 | Not Available | Positive | 2111768 - 2112172 | 14663.6 |
| hypothetical protein | D1781_10560 | Not Available | Negative | 2112194 - 2113693 | 52300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
