Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | D1781_10465 | Not Available | Positive | 2093533 - 2094039 | 18426.7 |
| oxidoreductase | D1781_10470 | Not Available | Negative | 2094095 - 2094988 | 31588.4 |
| xre family transcriptional regulator | D1781_10475 | Not Available | Positive | 2095091 - 2095942 | 30573.3 |
| rubrerythrin family protein | D1781_10480 | Not Available | Negative | 2095903 - 2096970 | 37295.9 |
| hypothetical protein | D1781_10485 | Not Available | Negative | 2096967 - 2097824 | 32000.2 |
| siderophore-interacting protein | D1781_10490 | Not Available | Negative | 2097871 - 2098827 | 33932.6 |
| dead/deah box helicase | D1781_10495 | Not Available | Negative | 2098867 - 2100714 | 67139.6 |
| sgnh/gdsl hydrolase family protein | D1781_10500 | Not Available | Positive | 2100835 - 2101602 | 27911.1 |
| d-alanyl-d-alanine carboxypeptidase | D1781_10505 | Not Available | Negative | 2101599 - 2102774 | 40973.3 |
| rna methyltransferase | D1781_10510 | Not Available | Negative | 2102882 - 2103694 | 29144.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
