Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recq family atp-dependent dna helicase | D1781_10415 | Not Available | Positive | 2079648 - 2081348 | 60472.1 |
| hypothetical protein | D1781_10420 | Not Available | Positive | 2081359 - 2081724 | 12142.8 |
| sodium:proton antiporter | D1781_10425 | Not Available | Negative | 2081899 - 2083545 | 58958.9 |
| hypothetical protein | D1781_10430 | Not Available | Positive | 2083999 - 2084937 | 30829.1 |
| helix-turn-helix domain-containing protein | D1781_10435 | Not Available | Negative | 2085005 - 2086258 | 44278.1 |
| hypothetical protein | D1781_10440 | Not Available | Positive | 2086236 - 2086904 | 22720.6 |
| dna polymerase y family protein | D1781_10445 | Not Available | Positive | 2086901 - 2088448 | 54418.2 |
| uracil-dna glycosylase | D1781_10450 | Not Available | Negative | 2088528 - 2089163 | 22084.4 |
| sdr family nad(p)-dependent oxidoreductase | D1781_10455 | Not Available | Positive | 2089225 - 2089920 | 23754.5 |
| error-prone dna polymerase | D1781_10460 | Not Available | Positive | 2090028 - 2093492 | 125084.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
