Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D1781_10255 | Not Available | Negative | 2045945 - 2046751 | 28802.8 |
| atp-binding cassette domain-containing protein | D1781_10260 | Not Available | Negative | 2046748 - 2047743 | 35219.2 |
| hnh endonuclease | D1781_10265 | Not Available | Positive | 2047944 - 2048669 | 25836.6 |
| tm0106 family recb-like putative nuclease | D1781_10270 | Not Available | Positive | 2048722 - 2052204 | 125591.0 |
| xre family transcriptional regulator | D1781_10275 | Not Available | Negative | 2052229 - 2053464 | 43116.6 |
| hypothetical protein | D1781_10280 | Not Available | Positive | 2053427 - 2054140 | 25887.4 |
| dienelactone hydrolase | D1781_10285 | Not Available | Negative | 2054137 - 2054952 | 28364.9 |
| had family hydrolase | D1781_10290 | Not Available | Positive | 2054951 - 2055637 | 23424.0 |
| marr family transcriptional regulator | D1781_10295 | Not Available | Negative | 2055657 - 2056139 | 17287.4 |
| hnh endonuclease | D1781_10300 | Not Available | Negative | 2056253 - 2057179 | 32044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
