Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D1781_10055 | Not Available | Negative | 2002125 - 2002814 | 24060.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | D1781_10060 | Not Available | Negative | 2002811 - 2003818 | 32465.1 |
| biopolymer transporter tol | D1781_10065 | Not Available | Positive | 2004035 - 2004367 | 12090.9 |
| hypothetical protein | D1781_10070 | Not Available | Negative | 2004364 - 2005248 | 30131.9 |
| pyridoxamine 5'-phosphate oxidase family protein | D1781_10075 | Not Available | Positive | 2005339 - 2005953 | 22633.0 |
| hypothetical protein | D1781_10080 | Not Available | Negative | 2005973 - 2006455 | 18082.4 |
| esterase-like activity of phytase family protein | D1781_10085 | Not Available | Positive | 2006683 - 2008269 | 55020.5 |
| aldo/keto reductase | D1781_10090 | Not Available | Negative | 2008327 - 2009316 | 36176.7 |
| class i sam-dependent methyltransferase | D1781_10095 | Not Available | Positive | 2009454 - 2010275 | 27772.1 |
| sdr family oxidoreductase | D1781_10100 | Not Available | Negative | 2010281 - 2011048 | 25181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
