Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stk1 family pasta domain-containing ser/thr kinase | D1781_00955 | Not Available | Positive | 186630 - 188378 | 60997.3 |
| aminodeoxychorismate/anthranilate synthase component ii | D1781_00960 | Not Available | Negative | 188418 - 189053 | 22419.7 |
| cell division protein crga | D1781_00965 | Not Available | Positive | 189117 - 189365 | 9190.49 |
| rhomboid family intramembrane serine protease | D1781_00970 | Not Available | Negative | 189527 - 190255 | 25439.8 |
| peptidylprolyl isomerase | D1781_00975 | Not Available | Negative | 190260 - 190802 | 19422.8 |
| hypothetical protein | D1781_00980 | Not Available | Positive | 190998 - 191654 | 21881.1 |
| lysr family transcriptional regulator | D1781_00985 | Not Available | Negative | 191710 - 192588 | 31505.7 |
| aldehyde dehydrogenase family protein | D1781_00990 | Not Available | Positive | 192673 - 196077 | 121173.0 |
| hypothetical protein | D1781_00995 | Not Available | Positive | 196205 - 196753 | 19843.7 |
| signal peptidase i | D1781_01000 | Not Available | Negative | 196756 - 198228 | 50487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
