Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk motif protein | D1781_09955 | Not Available | Negative | 1981494 - 1982462 | 34484.5 |
| hypothetical protein | D1781_09960 | Not Available | Negative | 1982459 - 1985155 | 99165.1 |
| dna cytosine methyltransferase | D1781_09965 | Not Available | Negative | 1985235 - 1986380 | 42068.8 |
| very short patch repair endonuclease | D1781_09970 | Not Available | Positive | 1986494 - 1986889 | 15300.3 |
| shoct domain-containing protein | D1781_09975 | Not Available | Negative | 1987522 - 1988817 | 44083.9 |
| hypothetical protein | D1781_09980 | Not Available | Positive | 1989082 - 1989429 | 12956.0 |
| hypothetical protein | D1781_09985 | Not Available | Negative | 1989462 - 1989905 | 16742.3 |
| 1,4-beta-xylanase | D1781_09990 | Not Available | Positive | 1989976 - 1990914 | 34951.8 |
| xre family transcriptional regulator | D1781_09995 | Not Available | Negative | 1990923 - 1991765 | 30821.8 |
| sdr family oxidoreductase | D1781_10000 | Not Available | Positive | 1991851 - 1992630 | 26627.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
