Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | D1781_09745 | Not Available | Negative | 1938334 - 1939563 | 43340.8 |
| hypothetical protein | D1781_09750 | Not Available | Negative | 1939560 - 1940267 | 25433.8 |
| alkene reductase | D1781_09755 | Not Available | Negative | 1940391 - 1941464 | 37889.5 |
| hypothetical protein | D1781_09760 | Not Available | Positive | 1941628 - 1941837 | 7451.71 |
| aldo/keto reductase | D1781_09765 | Not Available | Positive | 1942025 - 1943002 | 35762.9 |
| duf1266 domain-containing protein | D1781_09775 | Not Available | Positive | 1944052 - 1945137 | 39892.6 |
| hypothetical protein | D1781_09780 | Not Available | Positive | 1945414 - 1946172 | 26179.2 |
| glyoxalase | D1781_09785 | Not Available | Negative | 1946198 - 1946587 | 13444.1 |
| hypothetical protein | D1781_09790 | Not Available | Positive | 1946369 - 1947298 | 33751.8 |
| patatin-like phospholipase family protein | D1781_09795 | Not Available | Positive | 1947505 - 1948443 | 32079.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
