Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | D1781_09645 | Not Available | Positive | 1919155 - 1920294 | 37950.4 |
| glucosamine-6-phosphate deaminase | D1781_09650 | Not Available | Negative | 1920470 - 1921258 | 27444.6 |
| hypothetical protein | D1781_09655 | Not Available | Negative | 1921267 - 1922718 | 49458.9 |
| carbohydrate abc transporter permease | D1781_09660 | Not Available | Negative | 1922843 - 1923739 | 32130.2 |
| sugar abc transporter permease | D1781_09665 | Not Available | Negative | 1923744 - 1924742 | 35506.7 |
| carbohydrate abc transporter, n-acetylglucosamine/diacetylchitobiose-binding protein | D1781_09670 | Not Available | Negative | 1924739 - 1926154 | 49763.9 |
| sugar isomerase domain-containing protein | D1781_09675 | Not Available | Negative | 1926198 - 1926962 | 26041.8 |
| murr/rpir family transcriptional regulator | D1781_09680 | Not Available | Negative | 1926959 - 1927948 | 34869.2 |
| n-acetylglucosamine kinase | D1781_09685 | Not Available | Positive | 1928009 - 1929061 | 35132.2 |
| gnat family n-acetyltransferase | D1781_09690 | Not Available | Positive | 1929128 - 1929727 | 21303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
