Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | D1781_09540 | Not Available | Negative | 1897726 - 1898898 | 39956.4 |
| fad-dependent oxidoreductase | D1781_09545 | Not Available | Negative | 1898901 - 1900436 | 53692.4 |
| fmn-binding protein | D1781_09550 | Not Available | Negative | 1900433 - 1900918 | 15309.9 |
| sigma-70 family rna polymerase sigma factor | D1781_09555 | Not Available | Positive | 1901092 - 1901595 | 18965.6 |
| zf-hc2 domain-containing protein | D1781_09560 | Not Available | Positive | 1901592 - 1902296 | 24726.2 |
| nad-dependent epimerase/dehydratase family protein | D1781_09565 | Not Available | Negative | 1902329 - 1903297 | 34178.4 |
| hypothetical protein | D1781_09570 | Not Available | Positive | 1903281 - 1904237 | 33282.6 |
| mfs transporter | D1781_09575 | Not Available | Negative | 1904245 - 1905678 | 47766.4 |
| tetr/acrr family transcriptional regulator | D1781_09580 | Not Available | Positive | 1905795 - 1906355 | 20135.9 |
| sdr family nad(p)-dependent oxidoreductase | D1781_09590 | Not Available | Negative | 1907255 - 1907944 | 23823.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
