Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | D1781_09340 | Not Available | Positive | 1852665 - 1853420 | 26580.8 |
| universal stress protein | D1781_09345 | Not Available | Negative | 1853430 - 1854290 | 30607.5 |
| hypothetical protein | D1781_09350 | Not Available | Negative | 1854325 - 1855155 | 29771.3 |
| alpha/beta hydrolase | D1781_09355 | Not Available | Negative | 1855206 - 1856084 | 30199.6 |
| hnh endonuclease | D1781_09360 | Not Available | Negative | 1856264 - 1857700 | 51719.3 |
| alpha/beta fold hydrolase | D1781_09365 | Not Available | Positive | 1857639 - 1859402 | 63074.3 |
| gmc family oxidoreductase | D1781_09370 | Not Available | Positive | 1859414 - 1860940 | 54661.3 |
| hypothetical protein | D1781_09375 | Not Available | Negative | 1860952 - 1861494 | 18438.2 |
| transferase | D1781_09380 | Not Available | Positive | 1861533 - 1863338 | 62822.5 |
| abc transporter permease | D1781_09385 | Not Available | Negative | 1863461 - 1864297 | 28677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
