Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | D1781_09290 | Not Available | Negative | 1842949 - 1843629 | 23499.0 |
| antibiotic biosynthesis monooxygenase | D1781_09295 | Not Available | Positive | 1843696 - 1844316 | 22690.4 |
| nerd domain-containing protein | D1781_09300 | Not Available | Negative | 1844255 - 1845070 | 28673.0 |
| gaf domain-containing protein | D1781_09305 | Not Available | Negative | 1845225 - 1846919 | 60850.8 |
| glutamine amidotransferase | D1781_09310 | Not Available | Negative | 1848438 - 1849166 | 26006.9 |
| alpha/beta fold hydrolase | D1781_09315 | Not Available | Positive | 1849228 - 1850061 | 28522.7 |
| hypothetical protein | D1781_09320 | Not Available | Negative | 1850273 - 1850737 | 17367.2 |
| pyridoxamine 5'-phosphate oxidase | D1781_09325 | Not Available | Positive | 1850819 - 1851445 | 22753.6 |
| ester cyclase | D1781_09330 | Not Available | Positive | 1851703 - 1852095 | 14506.2 |
| hypothetical protein | D1781_09335 | Not Available | Negative | 1852098 - 1852568 | 17096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
