Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | D1781_09130 | Not Available | Negative | 1812533 - 1813510 | 32429.7 |
| trna (adenine-n1)-methyltransferase | D1781_09135 | Not Available | Negative | 1813620 - 1814675 | 37561.7 |
| had family phosphatase | D1781_09140 | Not Available | Negative | 1814606 - 1815277 | 23694.3 |
| pac2 family protein | D1781_09145 | Not Available | Positive | 1815381 - 1816313 | 33959.9 |
| duf559 domain-containing protein | D1781_09150 | Not Available | Positive | 1816431 - 1817345 | 33256.2 |
| undecaprenyl-diphosphate phosphatase | D1781_09155 | Not Available | Negative | 1817423 - 1818271 | 30218.9 |
| hypothetical protein | D1781_09160 | Not Available | Negative | 1818409 - 1818957 | 18549.9 |
| hypothetical protein | D1781_09165 | Not Available | Negative | 1818954 - 1819616 | 22758.1 |
| luxr family transcriptional regulator | D1781_09170 | Not Available | Negative | 1819714 - 1821081 | 45091.5 |
| pirin family protein | D1781_09175 | Not Available | Negative | 1821186 - 1822211 | 36567.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
