Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh/band 7/phb domain protein | D1781_09080 | Not Available | Positive | 1802140 - 1803201 | 37738.6 |
| glycerophosphodiester phosphodiesterase | D1781_09085 | Not Available | Positive | 1803198 - 1803923 | 25035.1 |
| rna polymerase-binding protein rbpa | D1781_09090 | Not Available | Positive | 1804043 - 1804414 | 13985.5 |
| fpg/nei family dna glycosylase | D1781_09095 | Not Available | Negative | 1804491 - 1805273 | 28571.2 |
| apolipoprotein n-acyltransferase | D1781_09100 | Not Available | Negative | 1805287 - 1806891 | 55801.7 |
| rna helicase | D1781_09105 | Not Available | Negative | 1806908 - 1809349 | 91392.9 |
| twin-arginine translocase subunit tatc | D1781_09110 | Not Available | Negative | 1809391 - 1810137 | 26857.0 |
| twin-arginine translocase tata/tate family subunit | D1781_09115 | Not Available | Negative | 1810188 - 1810445 | 9528.48 |
| wyl domain-containing protein | D1781_09120 | Not Available | Negative | 1810559 - 1811542 | 36249.0 |
| wyl domain-containing protein | D1781_09125 | Not Available | Negative | 1811535 - 1812524 | 35590.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
