Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yihy/virulence factor brkb family protein | D1781_09030 | Not Available | Negative | 1793674 - 1794885 | 42630.0 |
| hypothetical protein | D1781_09035 | Not Available | Negative | 1794941 - 1795417 | 15342.2 |
| aminotransferase class v-fold plp-dependent enzyme | D1781_09040 | Not Available | Positive | 1795581 - 1796801 | 43671.5 |
| marr family transcriptional regulator | D1781_09045 | Not Available | Negative | 1796880 - 1797347 | 16375.3 |
| polyketide cyclase | D1781_09050 | Not Available | Negative | 1797337 - 1797765 | 15037.6 |
| na+/h+ antiporter | D1781_09055 | Not Available | Positive | 1797958 - 1799529 | 55475.6 |
| hypothetical protein | D1781_09060 | Not Available | Negative | 1799542 - 1800222 | 23556.4 |
| nudix domain-containing protein | D1781_09065 | Not Available | Negative | 1800318 - 1800791 | 17742.6 |
| sdr family oxidoreductase | D1781_09070 | Not Available | Negative | 1800793 - 1801524 | 25907.7 |
| nfed family protein | D1781_09075 | Not Available | Positive | 1801646 - 1802143 | 16931.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
