Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3043 domain-containing protein | D1781_08930 | Not Available | Negative | 1773918 - 1774481 | 21176.0 |
| m20/m25/m40 family metallo-hydrolase | D1781_08935 | Not Available | Positive | 1774517 - 1775926 | 48319.9 |
| iron-sulfur cluster assembly accessory protein | D1781_08940 | Not Available | Positive | 1775973 - 1776341 | 13001.2 |
| cytochrome c oxidase subunit ii | D1781_08945 | Not Available | Positive | 1776539 - 1777483 | 35139.8 |
| cytochrome c oxidase subunit i | D1781_08950 | Not Available | Positive | 1777500 - 1779254 | 64232.7 |
| cytochrome c oxidase subunit 4 | D1781_08955 | Not Available | Positive | 1779258 - 1779674 | 15071.2 |
| hnh endonuclease | D1781_08960 | Not Available | Negative | 1779732 - 1781174 | 52434.1 |
| nudix domain-containing protein | D1781_08965 | Not Available | Negative | 1781336 - 1781797 | 16747.9 |
| cytochrome bc complex cytochrome b subunit | D1781_08970 | Not Available | Negative | 1781790 - 1783442 | 61182.1 |
| ubiquinol-cytochrome c reductase | D1781_08975 | Not Available | Negative | 1783426 - 1784508 | 39332.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
