Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | D1781_08880 | Not Available | Positive | 1763385 - 1764050 | 22876.4 |
| duf552 domain-containing protein | D1781_08885 | Not Available | Positive | 1764179 - 1764622 | 16351.5 |
| yggt family protein | D1781_08890 | Not Available | Positive | 1764692 - 1764994 | 10938.8 |
| diviva domain-containing protein | D1781_08895 | Not Available | Positive | 1765156 - 1765803 | 23919.8 |
| signal peptidase ii | D1781_08900 | Not Available | Positive | 1765889 - 1766380 | 17253.7 |
| rlua family pseudouridine synthase | D1781_08905 | Not Available | Positive | 1766382 - 1767299 | 32449.7 |
| dna polymerase iii subunit alpha | D1781_08910 | Not Available | Positive | 1767400 - 1770909 | 128835.0 |
| histidinol dehydrogenase | D1781_08915 | Not Available | Positive | 1770964 - 1772289 | 45574.3 |
| transcriptional repressor nrdr | D1781_08920 | Not Available | Positive | 1772362 - 1772835 | 17158.3 |
| quinone-dependent dihydroorotate dehydrogenase | D1781_08925 | Not Available | Positive | 1772897 - 1773871 | 33554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
