Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_08830 | Not Available | Positive | 1750852 - 1751322 | 15608.1 |
| penicillin-binding protein 2 | D1781_08835 | Not Available | Positive | 1751404 - 1753149 | 60764.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | D1781_08840 | Not Available | Positive | 1753256 - 1754671 | 48441.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | D1781_08845 | Not Available | Positive | 1754671 - 1755813 | 40925.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | D1781_08850 | Not Available | Positive | 1755810 - 1757300 | 52304.9 |
| cell division protein ftsw | D1781_08855 | Not Available | Positive | 1757306 - 1758568 | 43010.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | D1781_08860 | Not Available | Positive | 1758565 - 1759656 | 37659.5 |
| udp-n-acetylmuramate--l-alanine ligase | D1781_08865 | Not Available | Positive | 1759653 - 1761059 | 48963.7 |
| hypothetical protein | D1781_08870 | Not Available | Positive | 1761056 - 1761946 | 30640.0 |
| cell division protein ftsz | D1781_08875 | Not Available | Positive | 1762097 - 1763335 | 42117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
