Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | D1781_08780 | Not Available | Positive | 1739239 - 1739928 | 24895.7 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | D1781_08785 | Not Available | Positive | 1739943 - 1741325 | 50757.2 |
| stk1 family pasta domain-containing ser/thr kinase | D1781_08790 | Not Available | Negative | 1741407 - 1742993 | 55368.0 |
| lysm peptidoglycan-binding domain-containing protein | D1781_08795 | Not Available | Negative | 1743067 - 1744035 | 33974.2 |
| dna-binding protein | D1781_08800 | Not Available | Positive | 1744172 - 1744513 | 12674.1 |
| hypothetical protein | D1781_08805 | Not Available | Positive | 1744849 - 1747377 | 79914.2 |
| polyprenyl synthetase family protein | D1781_08810 | Not Available | Negative | 1747514 - 1748632 | 40245.4 |
| duf3040 domain-containing protein | D1781_08815 | Not Available | Positive | 1748721 - 1749077 | 12565.3 |
| transcriptional regulator mraz | D1781_08820 | Not Available | Positive | 1749273 - 1749704 | 16201.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | D1781_08825 | Not Available | Positive | 1749830 - 1750822 | 35896.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
