Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | D1781_08680 | Not Available | Negative | 1716081 - 1717379 | 46629.9 |
| plp-dependent cysteine synthase family protein | D1781_08685 | Not Available | Negative | 1717376 - 1718344 | 33549.8 |
| hypothetical protein | D1781_08690 | Not Available | Negative | 1718435 - 1719181 | 26130.4 |
| proline racemase | D1781_08695 | Not Available | Negative | 1719295 - 1720296 | 35955.0 |
| dihydrodipicolinate synthase family protein | D1781_08700 | Not Available | Negative | 1720293 - 1721222 | 33542.7 |
| gntr family transcriptional regulator | D1781_08705 | Not Available | Negative | 1721262 - 1721924 | 23616.1 |
| nad-dependent epimerase/dehydratase family protein | D1781_08710 | Not Available | Positive | 1721997 - 1722983 | 35909.3 |
| deor/glpr transcriptional regulator | D1781_08715 | Not Available | Positive | 1723121 - 1723897 | 26981.2 |
| pts lactose transporter subunit iic | D1781_08720 | Not Available | Positive | 1723939 - 1725987 | 68975.4 |
| nudix hydrolase | D1781_08725 | Not Available | Positive | 1726048 - 1726935 | 30672.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
