Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | D1781_08630 | Not Available | Positive | 1706721 - 1707461 | 26248.1 |
| sdr family oxidoreductase | D1781_08635 | Not Available | Negative | 1707649 - 1708545 | 31362.1 |
| eama/rhat family transporter | D1781_08640 | Not Available | Positive | 1708629 - 1709468 | 27246.4 |
| cryptochrome/photolyase family protein | D1781_08645 | Not Available | Positive | 1709550 - 1711013 | 55215.3 |
| nadph:quinone reductase | D1781_08650 | Not Available | Negative | 1711065 - 1712081 | 34760.2 |
| diacylglycerol kinase family lipid kinase | D1781_08655 | Not Available | Positive | 1712118 - 1713095 | 33957.7 |
| gnat family n-acetyltransferase | D1781_08660 | Not Available | Positive | 1713118 - 1713669 | 19465.1 |
| lrp/asnc family transcriptional regulator | D1781_08665 | Not Available | Negative | 1713618 - 1714181 | 19704.5 |
| sulfurtransferase | D1781_08670 | Not Available | Positive | 1714180 - 1714602 | 14516.2 |
| phenylalanine ammonia-lyase | D1781_08675 | Not Available | Negative | 1714610 - 1716079 | 50144.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
