Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_08580 | Not Available | Positive | 1696145 - 1696327 | 6424.94 |
| voc family protein | D1781_08585 | Not Available | Positive | 1696383 - 1696691 | 11637.6 |
| rna-binding s4 domain-containing protein | D1781_08590 | Not Available | Negative | 1696768 - 1697130 | 13032.9 |
| s9 family peptidase | D1781_08595 | Not Available | Negative | 1697157 - 1698905 | 62999.3 |
| hypothetical protein | D1781_08600 | Not Available | Negative | 1699030 - 1700100 | 35910.1 |
| tetr family transcriptional regulator | D1781_08605 | Not Available | Positive | 1700226 - 1700816 | 21447.4 |
| n-acetylglutaminylglutamine amidotransferase | D1781_08610 | Not Available | Negative | 1700932 - 1702707 | 64454.1 |
| ybdk family carboxylate-amine ligase | D1781_08615 | Not Available | Negative | 1702717 - 1705257 | 92265.6 |
| hypothetical protein | D1781_08620 | Not Available | Negative | 1705448 - 1706008 | 17432.4 |
| histidine phosphatase family protein | D1781_08625 | Not Available | Positive | 1706146 - 1706724 | 21039.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
