Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | D1781_08530 | Not Available | Negative | 1685708 - 1686619 | 32302.7 |
| sugar abc transporter permease | D1781_08535 | Not Available | Negative | 1686619 - 1687806 | 42243.7 |
| extracellular solute-binding protein | D1781_08540 | Not Available | Negative | 1687835 - 1689091 | 43363.7 |
| amylo-alpha-1,6-glucosidase | D1781_08545 | Not Available | Negative | 1689118 - 1691025 | 66630.6 |
| laci family transcriptional regulator | D1781_08550 | Not Available | Positive | 1691132 - 1692112 | 35184.6 |
| hypothetical protein | D1781_08555 | Not Available | Positive | 1692148 - 1692594 | 15222.6 |
| cation transport regulator chab | D1781_08560 | Not Available | Negative | 1692619 - 1693017 | 14487.5 |
| nad(p)-dependent oxidoreductase | D1781_08565 | Not Available | Negative | 1693061 - 1693903 | 30464.3 |
| nad(p)h-hydrate epimerase | D1781_08570 | Not Available | Positive | 1694006 - 1694704 | 23043.1 |
| pyridine nucleotide-disulfide oxidoreductase | D1781_08575 | Not Available | Positive | 1694791 - 1696113 | 47920.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
