Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_08480 | Not Available | Positive | 1675903 - 1676505 | 21533.6 |
| mfs transporter | D1781_08485 | Not Available | Negative | 1676555 - 1677964 | 51500.6 |
| hypothetical protein | D1781_08490 | Not Available | Negative | 1678075 - 1678743 | 24804.8 |
| abc transporter permease | D1781_08495 | Not Available | Negative | 1678860 - 1679699 | 28760.0 |
| atp-binding cassette domain-containing protein | D1781_08500 | Not Available | Negative | 1679686 - 1680621 | 32248.9 |
| duf2092 domain-containing protein | D1781_08505 | Not Available | Negative | 1680618 - 1681661 | 35358.7 |
| hnh endonuclease | D1781_08510 | Not Available | Positive | 1682074 - 1683513 | 52162.4 |
| tetratricopeptide repeat protein | D1781_08515 | Not Available | Negative | 1683533 - 1684084 | 19749.4 |
| cysteine synthase a | D1781_08520 | Not Available | Positive | 1684173 - 1685108 | 32676.1 |
| serine o-acetyltransferase | D1781_08525 | Not Available | Positive | 1685105 - 1685659 | 19646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
