Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_08430 | Not Available | Positive | 1664478 - 1665794 | 47217.8 |
| pspc domain-containing protein | D1781_08435 | Not Available | Negative | 1665902 - 1666087 | 6864.97 |
| penicillin-binding protein | D1781_08440 | Not Available | Positive | 1666198 - 1668588 | 85817.4 |
| duf1905 domain-containing protein | D1781_08445 | Not Available | Negative | 1668683 - 1669111 | 15760.7 |
| llm class flavin-dependent oxidoreductase | D1781_08450 | Not Available | Positive | 1669315 - 1670115 | 27475.9 |
| atp-dependent clp protease atp-binding subunit | D1781_08455 | Not Available | Negative | 1670247 - 1672724 | 88782.7 |
| hypothetical protein | D1781_08460 | Not Available | Positive | 1673007 - 1673606 | 21397.7 |
| hypothetical protein | D1781_08465 | Not Available | Negative | 1673603 - 1673899 | 9760.21 |
| voc family protein | D1781_08470 | Not Available | Negative | 1673964 - 1674386 | 15196.8 |
| gluconolaconase | D1781_08475 | Not Available | Negative | 1674451 - 1675788 | 45842.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
