Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | D1781_08325 | Not Available | Positive | 1644367 - 1644846 | 16369.6 |
| dna-binding response regulator | D1781_08330 | Not Available | Negative | 1644858 - 1645532 | 23273.1 |
| two-component sensor histidine kinase | D1781_08335 | Not Available | Negative | 1645529 - 1646749 | 41998.6 |
| duf3516 domain-containing protein | D1781_08340 | Not Available | Negative | 1646813 - 1649326 | 91643.0 |
| hypothetical protein | D1781_08345 | Not Available | Positive | 1649468 - 1649671 | 7186.18 |
| deoxyribodipyrimidine photolyase | D1781_08350 | Not Available | Positive | 1649706 - 1650983 | 46277.8 |
| phosphoenolpyruvate carboxylase | D1781_08355 | Not Available | Negative | 1650993 - 1653659 | 97293.0 |
| hypothetical protein | D1781_08360 | Not Available | Negative | 1653695 - 1653931 | 7944.17 |
| hypothetical protein | D1781_08365 | Not Available | Positive | 1653971 - 1654354 | 13545.9 |
| lysr family transcriptional regulator | D1781_08370 | Not Available | Negative | 1654373 - 1655020 | 23135.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
