Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D1781_08225 | Not Available | Negative | 1627469 - 1627720 | 8280.44 |
| mfs transporter | D1781_08230 | Not Available | Positive | 1627807 - 1629057 | 42850.2 |
| duf4287 domain-containing protein | D1781_08235 | Not Available | Positive | 1629067 - 1629309 | 8957.69 |
| qace family quaternary ammonium compound efflux smr transporter | D1781_08240 | Not Available | Positive | 1629427 - 1629750 | 10879.8 |
| fmn-dependent nadh-azoreductase | D1781_08245 | Not Available | Negative | 1629752 - 1630393 | 22688.9 |
| nad(p)/fad-dependent oxidoreductase | D1781_08250 | Not Available | Negative | 1630459 - 1632003 | 53756.9 |
| xre family transcriptional regulator | D1781_08255 | Not Available | Positive | 1632071 - 1632634 | 20504.5 |
| hnh endonuclease | D1781_08260 | Not Available | Positive | 1632698 - 1634284 | 57563.5 |
| vwa domain-containing protein | D1781_08265 | Not Available | Positive | 1634460 - 1635305 | 29061.6 |
| hypothetical protein | D1781_08270 | Not Available | Positive | 1635320 - 1636483 | 41731.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
