Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | D1781_08125 | Not Available | Negative | 1611444 - 1612856 | 48756.1 |
| epoxide hydrolase | D1781_08130 | Not Available | Negative | 1612937 - 1613968 | 37605.6 |
| cgnr zinc finger domain-containing protein | D1781_08135 | Not Available | Negative | 1614057 - 1614614 | 20426.1 |
| dmt family transporter | D1781_08140 | Not Available | Positive | 1614700 - 1615716 | 35182.4 |
| sdr family oxidoreductase | D1781_08145 | Not Available | Positive | 1615728 - 1616639 | 32390.8 |
| ahpc/tsa family protein | D1781_08150 | Not Available | Negative | 1616700 - 1617365 | 23145.1 |
| epoxide hydrolase | D1781_08155 | Not Available | Negative | 1617542 - 1618639 | 39879.9 |
| sdr family oxidoreductase | D1781_08160 | Not Available | Negative | 1618636 - 1619292 | 22721.5 |
| thioredoxin | D1781_08165 | Not Available | Positive | 1619349 - 1619729 | 14028.4 |
| oxidoreductase | D1781_08170 | Not Available | Positive | 1619835 - 1620692 | 31339.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
