Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ktsc domain-containing protein | D1781_08020 | Not Available | Negative | 1590013 - 1590225 | 7826.09 |
| alpha/beta hydrolase | D1781_08025 | Not Available | Negative | 1590386 - 1591327 | 33082.1 |
| 3-hydroxyacyl-coa dehydrogenase | D1781_08030 | Not Available | Negative | 1591357 - 1592208 | 29984.6 |
| nad(p)/fad-dependent oxidoreductase | D1781_08035 | Not Available | Negative | 1592222 - 1593721 | 54639.8 |
| tetr/acrr family transcriptional regulator | D1781_08040 | Not Available | Positive | 1593899 - 1594477 | 20798.8 |
| long-chain fatty acid--coa ligase | D1781_08045 | Not Available | Negative | 1594586 - 1596193 | 56999.8 |
| acyl-coa thioesterase | D1781_08050 | Not Available | Negative | 1596240 - 1596695 | 16537.5 |
| acyl-coa dehydrogenase | D1781_08060 | Not Available | Positive | 1597426 - 1598643 | 44283.6 |
| acetyl-coa c-acetyltransferase | D1781_08065 | Not Available | Positive | 1598731 - 1599963 | 42890.4 |
| hypothetical protein | D1781_08070 | Not Available | Positive | 1600123 - 1600539 | 14851.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
