Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | D1781_07910 | Not Available | Negative | 1568649 - 1569245 | 20622.4 |
| tyrosine--trna ligase | D1781_07915 | Not Available | Positive | 1569335 - 1570636 | 46707.1 |
| primosomal protein | D1781_07930 | Not Available | Positive | 1571423 - 1573048 | 59148.1 |
| had-iia family hydrolase | D1781_07935 | Not Available | Positive | 1573045 - 1574049 | 34956.9 |
| tlya family rna methyltransferase | D1781_07940 | Not Available | Positive | 1574171 - 1574989 | 27687.1 |
| nad kinase | D1781_07945 | Not Available | Positive | 1574986 - 1575894 | 32478.1 |
| dna repair protein recn | D1781_07950 | Not Available | Positive | 1575873 - 1577612 | 59670.0 |
| ctp synthase | D1781_07955 | Not Available | Positive | 1577664 - 1579388 | 62758.3 |
| nudix hydrolase | D1781_07960 | Not Available | Positive | 1579381 - 1580022 | 23658.8 |
| site-specific tyrosine recombinase xerd | D1781_07965 | Not Available | Positive | 1580153 - 1581052 | 31985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
